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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0329499 |
| Transcript ID | Lj0g3v0329499.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Aconitate hydratase [Medicago truncatula] gi|357453423|ref|XP_003596988.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 1 | 14 | 14 | – | – | |
| Phobius | 2 | 9 | 8 | – | – | |
| Phobius | 10 | 14 | 5 | – | – | |
| Phobius | 15 | 979 | 965 | – | – | |
| PANTHER | 67 | 474 | 408 | 0 | – | |
| PANTHER | 67 | 474 | 408 | 0 | ||
| SUPERFAMILY | 100 | 714 | 615 | 9.29E-232 | ||
| TIGRFAM | 104 | 976 | 873 | 0 | ||
| Gene3D | 105 | 327 | 223 | 1.40E-81 | ||
| Pfam | 146 | 649 | 504 | 2.00E-182 | ||
| CDD | 167 | 651 | 485 | 0 | – | |
| PRINTS | 228 | 241 | 14 | 9.70E-46 | ||
| PRINTS | 252 | 260 | 9 | 9.70E-46 | ||
| PRINTS | 281 | 294 | 14 | 9.70E-46 | ||
| PRINTS | 295 | 310 | 16 | 9.70E-46 | ||
| Gene3D | 328 | 448 | 121 | 6.60E-38 | ||
| PRINTS | 357 | 370 | 14 | 9.70E-46 | ||
| PRINTS | 371 | 384 | 14 | 9.70E-46 | ||
| Gene3D | 449 | 474 | 26 | 1.80E-67 | ||
| PRINTS | 453 | 467 | 15 | 9.70E-46 | ||
| PANTHER | 503 | 738 | 236 | 0 | ||
| PANTHER | 503 | 738 | 236 | 0 | – | |
| Gene3D | 506 | 662 | 157 | 1.80E-67 | ||
| ProSitePatterns | 514 | 530 | 17 | – | ||
| PRINTS | 518 | 529 | 12 | 9.70E-46 | ||
| ProSitePatterns | 580 | 593 | 14 | – | ||
| PRINTS | 580 | 593 | 14 | 9.70E-46 | ||
| SUPERFAMILY | 718 | 975 | 258 | 5.89E-86 | ||
| Gene3D | 724 | 976 | 253 | 2.20E-77 | ||
| PANTHER | 754 | 799 | 46 | 0 | ||
| PANTHER | 754 | 799 | 46 | 0 | – | |
| CDD | 755 | 925 | 171 | 4.50E-109 | – | |
| Pfam | 778 | 905 | 128 | 9.10E-47 | ||
| PANTHER | 838 | 979 | 142 | 0 | ||
| PANTHER | 838 | 979 | 142 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0329499.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0329499.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.