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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0330279 |
| Transcript ID | Lj0g3v0330279.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: coatomer subunit alpha-1-like [Cicer arietinum] gi|502118198|ref|XP_004496148.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 2 | 37 | 36 | 11 | ||
| PANTHER | 2 | 412 | 411 | 0 | – | |
| PANTHER | 2 | 412 | 411 | 0 | – | |
| SUPERFAMILY | 4 | 168 | 165 | 5.49E-75 | ||
| Gene3D | 4 | 329 | 326 | 4.20E-85 | ||
| ProSiteProfiles | 5 | 326 | 322 | 51.86 | ||
| ProSiteProfiles | 5 | 46 | 42 | 8.704 | ||
| CDD | 9 | 314 | 306 | 8.81E-73 | – | |
| SMART | 40 | 79 | 40 | 4.10E-07 | ||
| Pfam | 43 | 79 | 37 | 8.90E-06 | ||
| ProSiteProfiles | 47 | 88 | 42 | 12.58 | ||
| SMART | 82 | 121 | 40 | 6.60E-09 | ||
| Pfam | 84 | 121 | 38 | 6.40E-09 | ||
| ProSiteProfiles | 89 | 130 | 42 | 14.118 | ||
| PRINTS | 108 | 122 | 15 | 1.70E-08 | ||
| SMART | 124 | 163 | 40 | 6.30E-10 | ||
| Pfam | 126 | 163 | 38 | 2.90E-07 | ||
| ProSiteProfiles | 131 | 172 | 42 | 14.753 | ||
| ProSitePatterns | 150 | 164 | 15 | – | ||
| PRINTS | 150 | 164 | 15 | 1.70E-08 | ||
| SMART | 193 | 232 | 40 | 2.90E-05 | ||
| SUPERFAMILY | 196 | 315 | 120 | 5.49E-75 | ||
| ProSiteProfiles | 200 | 234 | 35 | 12.079 | ||
| Pfam | 211 | 291 | 81 | 1.10E-06 | ||
| SMART | 237 | 276 | 40 | 1.60E-06 | ||
| ProSiteProfiles | 244 | 285 | 42 | 15.154 | ||
| PRINTS | 263 | 277 | 15 | 1.70E-08 | ||
| SMART | 279 | 317 | 39 | 140 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0330279.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0330279.1, powered by CORGI.
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