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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0333429 |
| Transcript ID | Lj0g3v0333429.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: low affinity sulfate transporter 3-like [Glycine max] gi|356515820|ref|XP_003526596.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 140 | 140 | – | – | |
| PANTHER | 9 | 660 | 652 | 0 | ||
| PANTHER | 9 | 660 | 652 | 0 | ||
| TIGRFAM | 76 | 648 | 573 | 5.50E-202 | ||
| Pfam | 89 | 475 | 387 | 4.60E-125 | ||
| TMHMM | 141 | 158 | 18 | – | – | |
| Phobius | 141 | 161 | 21 | – | – | |
| Phobius | 162 | 172 | 11 | – | – | |
| Phobius | 173 | 191 | 19 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 192 | 202 | 11 | – | – | |
| TMHMM | 202 | 221 | 20 | – | – | |
| Phobius | 203 | 221 | 19 | – | – | |
| Phobius | 222 | 256 | 35 | – | – | |
| TMHMM | 257 | 279 | 23 | – | – | |
| Phobius | 257 | 278 | 22 | – | – | |
| Phobius | 279 | 284 | 6 | – | – | |
| Phobius | 285 | 306 | 22 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 307 | 344 | 38 | – | – | |
| Phobius | 345 | 365 | 21 | – | – | |
| Phobius | 366 | 376 | 11 | – | – | |
| Phobius | 377 | 397 | 21 | – | – | |
| TMHMM | 378 | 400 | 23 | – | – | |
| Phobius | 398 | 402 | 5 | – | – | |
| Phobius | 403 | 427 | 25 | – | – | |
| TMHMM | 413 | 432 | 20 | – | – | |
| Phobius | 428 | 433 | 6 | – | – | |
| Phobius | 434 | 455 | 22 | – | – | |
| TMHMM | 442 | 464 | 23 | – | – | |
| Phobius | 456 | 474 | 19 | – | – | |
| TMHMM | 471 | 493 | 23 | – | – | |
| Phobius | 475 | 499 | 25 | – | – | |
| Phobius | 500 | 660 | 161 | – | – | |
| CDD | 528 | 645 | 118 | 2.32E-22 | – | |
| Pfam | 531 | 648 | 118 | 4.40E-25 | ||
| SUPERFAMILY | 534 | 650 | 117 | 1.18E-15 | ||
| Gene3D | 534 | 650 | 117 | 3.10E-15 | ||
| ProSiteProfiles | 544 | 652 | 109 | 20.173 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0333429.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0333429.1, powered by CORGI.
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