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Lj0g3v0335869.1

Overview

Field Value
Gene ID Lj0g3v0335869
Transcript ID Lj0g3v0335869.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: calcium-dependent protein kinase 20-like [Glycine max] gi|356537258|ref|XP_003537146.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24349:SF81
1 274 274 3.20E-242 –
PANTHER
PTHR24349
1 274 274 3.20E-242 –
PIRSF
PIRSF000654
4 285 282 4.50E-27 –
Gene3D
G3DSA:3.30.200.20
11 116 106 1.50E-28 –
SUPERFAMILY
SSF56112
18 279 262 9.72E-81
IPR011009
CDD
cd05117
19 273 255 3.11E-140 –
SMART
SM00220
20 277 258 2.70E-93
IPR000719
Pfam
PF00069
20 274 255 8.00E-72
IPR000719
ProSiteProfiles
PS50011
20 279 260 46.152
IPR000719
ProSitePatterns
PS00107
26 53 28 –
IPR017441
Gene3D
G3DSA:1.10.510.10
117 274 158 2.90E-57 –
ProSitePatterns
PS00108
140 152 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj0g3v0335869.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0335869.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.