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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0342169 |
| Transcript ID | Lj0g3v0342169.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: plastidic glucose transporter 4-like [Glycine max] gi|356545878|ref|XP_003541360.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 65 | 65 | – | – | |
| PANTHER | 31 | 507 | 477 | 0 | – | |
| PANTHER | 31 | 507 | 477 | 0 | – | |
| TIGRFAM | 48 | 499 | 452 | 1.20E-102 | ||
| SUPERFAMILY | 55 | 500 | 446 | 4.97E-63 | ||
| Phobius | 66 | 86 | 21 | – | – | |
| Gene3D | 68 | 255 | 188 | 1.10E-27 | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| ProSiteProfiles | 69 | 492 | 424 | 51.362 | ||
| CDD | 70 | 485 | 416 | 7.60E-27 | ||
| Pfam | 72 | 501 | 430 | 4.50E-105 | ||
| PRINTS | 77 | 87 | 11 | 1.40E-23 | ||
| Phobius | 87 | 105 | 19 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 126 | 21 | – | – | |
| Phobius | 127 | 137 | 11 | – | – | |
| Phobius | 138 | 156 | 19 | – | – | |
| TMHMM | 140 | 157 | 18 | – | – | |
| Phobius | 157 | 161 | 5 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| PRINTS | 162 | 181 | 20 | 1.40E-23 | ||
| Phobius | 162 | 183 | 22 | – | – | |
| ProSitePatterns | 167 | 192 | 26 | – | ||
| Phobius | 184 | 194 | 11 | – | – | |
| TMHMM | 195 | 217 | 23 | – | – | |
| Phobius | 195 | 217 | 23 | – | – | |
| Phobius | 218 | 222 | 5 | – | – | |
| TMHMM | 222 | 244 | 23 | – | – | |
| Phobius | 223 | 244 | 22 | – | – | |
| Phobius | 245 | 308 | 64 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 309 | 330 | 22 | – | – | |
| Gene3D | 311 | 498 | 188 | 2.80E-14 | – | |
| PRINTS | 317 | 327 | 11 | 1.40E-23 | ||
| Phobius | 331 | 341 | 11 | – | – | |
| TMHMM | 338 | 360 | 23 | – | – | |
| Phobius | 342 | 363 | 22 | – | – | |
| Phobius | 364 | 369 | 6 | – | – | |
| Phobius | 370 | 390 | 21 | – | – | |
| TMHMM | 372 | 394 | 23 | – | – | |
| Phobius | 391 | 401 | 11 | – | – | |
| Phobius | 402 | 426 | 25 | – | – | |
| TMHMM | 404 | 426 | 23 | – | – | |
| PRINTS | 404 | 425 | 22 | 1.40E-23 | ||
| PRINTS | 427 | 439 | 13 | 1.40E-23 | ||
| Phobius | 427 | 437 | 11 | – | – | |
| TMHMM | 438 | 460 | 23 | – | – | |
| Phobius | 438 | 458 | 21 | – | – | |
| Phobius | 459 | 463 | 5 | – | – | |
| TMHMM | 464 | 486 | 23 | – | – | |
| Phobius | 464 | 485 | 22 | – | – | |
| Phobius | 486 | 508 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0342169.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0342169.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.