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Lj0g3v0342649.1

Overview

Field Value
Gene ID Lj0g3v0342649
Transcript ID Lj0g3v0342649.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein kinase PINOID-like [Cicer arietinum] gi|502140300|ref|XP_004504155.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 34 34 – –
PANTHER
PTHR24351:SF60
17 254 238 2.90E-243 –
PANTHER
PTHR24351
17 254 238 2.90E-243 –
SUPERFAMILY
SSF56112
68 245 178 1.48E-77
IPR011009
Gene3D
G3DSA:3.30.200.20
80 185 106 2.50E-24 –
CDD
cd05574
81 417 337 1.73E-162 –
ProSiteProfiles
PS50011
83 400 318 43.34
IPR000719
Pfam
PF00069
83 245 163 6.60E-31
IPR000719
SMART
SM00220
83 400 318 7.60E-85
IPR000719
Coils
Coil
126 153 28 – –
Gene3D
G3DSA:1.10.510.10
186 246 61 7.50E-55 –
ProSitePatterns
PS00108
219 231 13 –
IPR008271
SUPERFAMILY
SSF56112
284 422 139 1.48E-77
IPR011009
Gene3D
G3DSA:1.10.510.10
285 433 149 7.50E-55 –
PANTHER
PTHR24351:SF60
288 421 134 2.90E-243 –
PANTHER
PTHR24351
288 421 134 2.90E-243 –
Pfam
PF00069
294 400 107 1.90E-18
IPR000719

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0342649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0342649.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.