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Lj0g3v0344519.1

Overview

Field Value
Gene ID Lj0g3v0344519
Transcript ID Lj0g3v0344519.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-like protein Klp10A-like isoform X1 [Cicer arietinum] gi|502085138|ref|XP_004487846.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 41 41 – –
PANTHER
PTHR24115
1 23 23 9.20E-180
IPR027640
PANTHER
PTHR24115:SF511
1 23 23 9.20E-180 –
SUPERFAMILY
SSF52540
41 294 254 1.93E-68
IPR027417
Gene3D
G3DSA:3.40.850.10
42 294 253 1.00E-66
IPR001752
SMART
SM00129
45 295 251 5.40E-29
IPR001752
PANTHER
PTHR24115
46 295 250 9.20E-180
IPR027640
PANTHER
PTHR24115:SF511
46 295 250 9.20E-180 –
ProSiteProfiles
PS50067
47 295 249 65.864
IPR001752
Pfam
PF00225
53 294 242 3.30E-57
IPR001752
PRINTS
PR00380
128 149 22 1.80E-20
IPR001752
PRINTS
PR00380
238 255 18 1.80E-20
IPR001752
ProSitePatterns
PS00411
282 293 12 –
IPR019821
PRINTS
PR00380
283 295 13 1.80E-20
IPR001752

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj0g3v0344519.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0344519.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.