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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0347439 |
| Transcript ID | Lj0g3v0347439.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: low affinity cationic amino acid transporter 2-like [Glycine max] gi|356525397|ref|XP_003531311.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 3 | 260 | 258 | 4.80E-242 | ||
| PANTHER | 3 | 260 | 258 | 4.80E-242 | – | |
| Phobius | 6 | 25 | 20 | – | – | |
| TMHMM | 10 | 27 | 18 | – | – | |
| Pfam | 11 | 277 | 267 | 1.10E-29 | ||
| Phobius | 26 | 31 | 6 | – | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| Phobius | 32 | 55 | 24 | – | – | |
| Phobius | 56 | 74 | 19 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Phobius | 75 | 93 | 19 | – | – | |
| Phobius | 94 | 104 | 11 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 105 | 131 | 27 | – | – | |
| Phobius | 132 | 150 | 19 | – | – | |
| Phobius | 151 | 174 | 24 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 175 | 206 | 32 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| Phobius | 207 | 225 | 19 | – | – | |
| Phobius | 226 | 230 | 5 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 231 | 250 | 20 | – | – | |
| Phobius | 251 | 261 | 11 | – | – | |
| Phobius | 262 | 281 | 20 | – | – | |
| TMHMM | 263 | 282 | 20 | – | – | |
| Phobius | 282 | 286 | 5 | – | – | |
| TMHMM | 287 | 309 | 23 | – | – | |
| Phobius | 287 | 308 | 22 | – | – | |
| PANTHER | 308 | 383 | 76 | 4.80E-242 | – | |
| PANTHER | 308 | 383 | 76 | 4.80E-242 | ||
| Phobius | 309 | 319 | 11 | – | – | |
| TMHMM | 316 | 338 | 23 | – | – | |
| Pfam | 317 | 367 | 51 | 1.70E-16 | ||
| Phobius | 320 | 340 | 21 | – | – | |
| Phobius | 341 | 345 | 5 | – | – | |
| Phobius | 346 | 368 | 23 | – | – | |
| TMHMM | 348 | 368 | 21 | – | – | |
| Phobius | 369 | 387 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0347439.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0347439.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.