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Lj0g3v0353609.1

Overview

Field Value
Gene ID Lj0g3v0353609
Transcript ID Lj0g3v0353609.1
Lotus japonicus genome version MG20 v3.0
Description Methyltransferase FkbM family [Medicago truncatula] gi|357446127|ref|XP_003593341.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 29 29
Phobius 1 664 664
MobiDBLite 68 98 31
Coils 126 167 42
Coils 206 226 21
Coils 241 261 21
Coils 282 312 31
Coils 317 538 222
SUPERFAMILY 328 531 204 7.85E-08
PANTHER 328 820 493 2.00E-106
PANTHER 328 820 493 2.00E-106
MobiDBLite 402 430 29
MobiDBLite 526 563 38
Pfam 553 820 268 2.70E-51
Phobius 665 684 20
Phobius 685 836 152

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0353609.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0353609.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.