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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0362529 |
| Transcript ID | Lj0g3v0362529.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Glycine max] gi|356539325|ref|XP_003538149.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 46 | 46 | – | – | |
| PIRSF | 1 | 796 | 796 | 0 | ||
| PANTHER | 6 | 796 | 791 | 0 | – | |
| Coils | 16 | 36 | 21 | – | – | |
| Gene3D | 20 | 261 | 242 | 1.10E-16 | ||
| SUPERFAMILY | 57 | 264 | 208 | 6.71E-19 | ||
| SMART | 85 | 124 | 40 | 4.00E-04 | ||
| SMART | 173 | 209 | 37 | 210 | ||
| MobiDBLite | 314 | 341 | 28 | – | – | |
| SMART | 611 | 758 | 148 | 7.00E-37 | ||
| ProSiteProfiles | 611 | 758 | 148 | 39.588 | ||
| Pfam | 611 | 754 | 144 | 2.60E-22 | ||
| Gene3D | 665 | 774 | 110 | 4.60E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Biological process | Intracellular transport | The directed movement of substances within a cell. |
Expression pattern of Lj0g3v0362529.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0362529.1, powered by CORGI.
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