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PF00637

Source: Pfam

Description

Region in Clathrin and VPS

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006886
Biological process Intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Subterm of
Part of
GO:0016192
Biological process Vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Subterm of

Associated Lotus transcripts 45

Transcript Name Description Predicted domains Domain count
Lj0g3v0259479.1
– PREDICTED: vam6/Vps39-like protein-like isoform X2 [Cicer arietinum] gi|502153212|ref|XP_004509258.1|
Domains
12
Lj0g3v0267479.1
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356495434|ref|XP_003516582.1|
Domains
20
Lj0g3v0362529.1
– PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Glycine max] gi|356539325|ref|XP_003538149.1|
Domains
17
Lj1g3v3329860.1
– PREDICTED: vacuolar protein sorting-associated protein 11 homolog [Cicer arietinum] gi|502181646|ref|XP_004516854.1|
Domains
21
Lj2g3v1757300.1
– PREDICTED: vam6/Vps39-like protein-like [Glycine max] gi|356496767|ref|XP_003517237.1|
Domains
18
Lj2g3v2771110.1
– PREDICTED: clathrin heavy chain 2-like [Cicer arietinum] gi|502097571|ref|XP_004491025.1|
Domains
21
Lj3g3v0718650.1
– PREDICTED: transforming growth factor-beta receptor-associated protein 1 homolog isoform X1 [Cicer arietinum] gi|502155930|ref|XP_004510242.1|
Domains
11
Lj3g3v0718650.2
– PREDICTED: transforming growth factor-beta receptor-associated protein 1 homolog isoform X1 [Cicer arietinum] gi|502155930|ref|XP_004510242.1|
Domains
8
Lj3g3v2517500.2
– PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Glycine max] gi|356522472|ref|XP_003529870.1|
Domains
12
Lj3g3v2517500.3
– PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Glycine max] gi|356522472|ref|XP_003529870.1|
Domains
12
Lj3g3v2769380.1
– PREDICTED: vacuolar protein sorting-associated protein 18 homolog [Glycine max] gi|356549956|ref|XP_003543356.1|
Domains
11
Lj3g3v3026750.1
– PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Glycine max] gi|356544684|ref|XP_003540777.1|
Domains
19
Lj6g3v0497300.1
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356539985|ref|XP_003538472.1|
Domains
13
Lj6g3v0497300.2
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356539985|ref|XP_003538472.1|
Domains
22
LotjaGi1g1v0076400.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
21
LotjaGi1g1v0076400.3
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.4
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.5
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.6
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.7
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
20
LotjaGi1g1v0416300.1
– Vam6/Vps39-like protein; TAIR: AT4G36630.2 Vacuolar sorting protein 39; Swiss-Prot: sp|Q8R5L3|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr|G7LES7|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi1g1v0416300
Domains
14
LotjaGi1g1v0555100.1
– Vacuolar protein sorting-associated protein 11 like; TAIR: AT2G05170.1 vacuolar protein sorting 11; Swiss-Prot: sp|Q9SJ40|VPS11_ARATH Vacuolar protein-sorting-associated protein 11 homolog; TrEMBL-Plants: tr|I1KJF2|I1KJF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0555100
Domains
20
LotjaGi1g1v0555100.2
– Vacuolar protein sorting-associated protein 11 like; TAIR: AT2G05170.1 vacuolar protein sorting 11; Swiss-Prot: sp|Q9SJ40|VPS11_ARATH Vacuolar protein-sorting-associated protein 11 homolog; TrEMBL-Plants: tr|I1KJF2|I1KJF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0555100
Domains
20
LotjaGi2g1v0390200.1
– Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q96JC1|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr|A0A0R0LJG6|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200
Domains
16
LotjaGi2g1v0390200.2
– Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q96JC1|VPS39_HUMAN Vam6/Vps39-like protein; TrEMBL-Plants: tr|A0A0R0LJG6|A0A0R0LJG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390200
Domains
16
LotjaGi3g1v0087800.1
– Transforming growth factor-beta receptor-associated protein 1; TAIR: AT1G22860.1 Vacuolar sorting protein 39; Swiss-Prot: sp|A4IG72|TGFA1_DANRE Transforming growth factor-beta receptor-associated protein 1 homolog; TrEMBL-Plants: tr|A0A072TMN8|A0A072TMN8_MEDTR Vacuolar sorting protein 39 domain protein; Found in the gene: LotjaGi3g1v0087800
Domains
12
LotjaGi3g1v0170300.1
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A1J7HSN4|A0A1J7HSN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0170300
Domains
21
LotjaGi3g1v0170300.2
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0170300
Domains
14
LotjaGi3g1v0170300.3
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A1J7HSN4|A0A1J7HSN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0170300
Domains
21
LotjaGi3g1v0170300.4
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A1J7HSN4|A0A1J7HSN4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0170300
Domains
21
LotjaGi3g1v0403400.1
– Vacuolar protein sorting-associated protein 8 like; TAIR: AT4G00800.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q0P5W1|VPS8_MOUSE Vacuolar protein sorting-associated protein 8 homolog; TrEMBL-Plants: tr|I1KHP6|I1KHP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0403400
Domains
24
LotjaGi3g1v0440000.1
– Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|A0A0R0H958|A0A0R0H958_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000
Domains
10
LotjaGi3g1v0440000.2
– Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|K7M2S2|K7M2S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000
Domains
10
LotjaGi3g1v0440000.3
– Vacuolar protein sorting-associated protein 18 like; TAIR: AT1G12470.1 zinc ion binding protein; Swiss-Prot: sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog; TrEMBL-Plants: tr|K7M2S2|K7M2S2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0440000
Domains
10
LotjaGi3g1v0482300.1
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0482300
Domains
18
LotjaGi3g1v0482300.2
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0482300
Domains
11
LotjaGi3g1v0482300.3
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0482300
Domains
17
LotjaGi3g1v0482300.4
– Vacuolar protein sorting-associated protein 41 like; TAIR: AT1G08190.1 vacuolar protein sorting 41; Swiss-Prot: sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog; TrEMBL-Plants: tr|A0A151TNJ4|A0A151TNJ4_CAJCA Vacuolar protein sorting-associated protein 41 isogeny; Found in the gene: LotjaGi3g1v0482300
Domains
17
LotjaGi4g1v0117000.1
– Vam6/Vps39-like protein; TAIR: AT4G36630.1 Vacuolar sorting protein 39; Swiss-Prot: sp|Q8R5L3|VPS39_MOUSE Vam6/Vps39-like protein; TrEMBL-Plants: tr|G7LES7|G7LES7_MEDTR Vam6/Vps39-like protein; Found in the gene: LotjaGi4g1v0117000
Domains
16
LotjaGi6g1v0076900.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
22
LotjaGi6g1v0076900.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
22
LotjaGi6g1v0076900.3
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
21
LotjaGi6g1v0123700.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700
Domains
22
LotjaGi6g1v0123700.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2QYW2|CLH2_ORYSJ Clathrin heavy chain 2; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF50989 SUPERFAMILY 1 2.22