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Lj0g3v0363079.1

Overview

Field Value
Gene ID Lj0g3v0363079
Transcript ID Lj0g3v0363079.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: annexin-like protein RJ4-like isoform X3 [Cicer arietinum] gi|502158052|ref|XP_004511012.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 313 313 7.50E-210
PANTHER 1 313 313 7.50E-210
Gene3D 8 70 63 1.40E-23
SUPERFAMILY 9 311 303 6.81E-101
Pfam 14 75 62 1.50E-22
PRINTS 23 45 23 6.20E-23
SMART 26 78 53 2.00E-19
PRINTS 63 79 17 6.20E-23
Gene3D 71 151 81 4.20E-17
Pfam 86 150 65 2.60E-10
PRINTS 90 111 22 6.20E-23
SMART 98 150 53 2.70E-12
PRINTS 117 131 15 1.60E-15
PRINTS 159 179 21 1.60E-15
Gene3D 166 240 75 1.10E-13
Pfam 169 231 63 1.40E-11
SMART 182 233 52 0.13
PRINTS 224 242 19 1.60E-15
Gene3D 242 311 70 8.80E-19
Pfam 246 308 63 6.90E-15
PRINTS 252 272 21 6.20E-23
ProSitePatterns 256 308 53
SMART 256 308 53 5.10E-16
PRINTS 296 309 14 6.20E-23

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Molecular function Calcium-dependent phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj0g3v0363079.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0363079.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.