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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0084900 |
| Transcript ID | Lj1g3v0084900.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | cysteine synthase [Glycine max] gi|351727525|ref|NP_001235628.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 1.40E-249 | – | |
| PANTHER | 1 | 324 | 324 | 1.40E-249 | – | |
| SUPERFAMILY | 9 | 313 | 305 | 3.67E-103 | ||
| Pfam | 12 | 299 | 288 | 7.40E-68 | ||
| TIGRFAM | 13 | 311 | 299 | 4.00E-142 | ||
| TIGRFAM | 13 | 311 | 299 | 5.90E-136 | ||
| CDD | 17 | 307 | 291 | 5.77E-142 | – | |
| ProSitePatterns | 38 | 56 | 19 | – | ||
| Gene3D | 44 | 140 | 97 | 1.70E-42 | – | |
| Gene3D | 141 | 313 | 173 | 3.70E-83 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine synthase activity | Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate. | ||
| Biological process | Cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
Expression pattern of Lj1g3v0084900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0084900.1, powered by CORGI.
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