Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v0244390.1

Overview

Field Value
Gene ID Lj1g3v0244390
Transcript ID Lj1g3v0244390.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ZF-HD homeobox protein At4g24660-like [Cicer arietinum] gi|502095238|ref|XP_004490406.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31948:SF20
1 270 270 4.30E-123 –
PANTHER
PTHR31948
1 270 270 4.30E-123 –
MobiDBLite
mobidb-lite
1 31 31 – –
ProDom
PD125774
60 121 62 2.00E-20
IPR006456
Pfam
PF04770
62 114 53 3.70E-28
IPR006456
TIGRFAM
TIGR01566
63 114 52 3.00E-26
IPR006456
ProSiteProfiles
PS51523
64 113 50 26.821
IPR006456
MobiDBLite
mobidb-lite
119 209 91 – –
SUPERFAMILY
SSF46689
192 268 77 9.24E-20
IPR009057
Gene3D
G3DSA:1.10.10.60
195 269 75 1.40E-30
IPR009057
TIGRFAM
TIGR01565
207 264 58 7.70E-24
IPR006455

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v0244390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0244390.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.