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Lj1g3v0246810.1

Overview

Field Value
Gene ID Lj1g3v0246810
Transcript ID Lj1g3v0246810.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like [Cicer arietinum] gi|502144710|ref|XP_004505724.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 26 26 – –
PANTHER
PTHR11609:SF9
61 403 343 1.80E-199 –
PANTHER
PTHR11609
61 403 343 1.80E-199 –
Gene3D
G3DSA:3.30.200.20
92 190 99 1.50E-35 –
SUPERFAMILY
SSF56104
94 378 285 2.09E-80 –
Hamap
MF_00137
100 375 276 20.026
IPR028923
Pfam
PF01259
104 349 246 2.40E-74
IPR028923
CDD
cd01414
105 374 270 5.18E-128 –
ProSitePatterns
PS01057
178 192 15 –
IPR018236
Gene3D
G3DSA:3.30.470.20
191 320 130 4.70E-43
IPR013816
ProSitePatterns
PS01058
282 290 9 –
IPR018236

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004639
Molecular function Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate + ATP = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate.
Subterm of
GO:0006164
Biological process Purine nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj1g3v0246810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0246810.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.