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Lj1g3v0296890.1

Overview

Field Value
Gene ID Lj1g3v0296890
Transcript ID Lj1g3v0296890.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description ZIK1 protein [Medicago sativa] gi|28874836|emb|CAC84087.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 7 416 410 4.00E-263
SUPERFAMILY 20 284 265 1.62E-62
Gene3D 20 126 107 8.20E-20
CDD 24 284 261 9.81E-161
SMART 26 284 259 2.20E-55
ProSiteProfiles 26 284 259 40.16
Pfam 29 284 256 5.30E-50
Gene3D 127 285 159 1.30E-45
ProSitePatterns 150 162 13
MobiDBLite 296 322 27
Gene3D 339 397 59 9.00E-14
MobiDBLite 403 423 21
MobiDBLite 443 578 136
Coils 587 607 21

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj1g3v0296890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0296890.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.