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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0524380 |
| Transcript ID | Lj1g3v0524380.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Glycine max] gi|356519074|ref|XP_003528199.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 48 | 48 | – | – | |
| Phobius | 28 | 39 | 12 | – | – | |
| Phobius | 40 | 48 | 9 | – | – | |
| Phobius | 49 | 461 | 413 | – | – | |
| PANTHER | 51 | 461 | 411 | 2.30E-261 | – | |
| PANTHER | 51 | 461 | 411 | 2.30E-261 | – | |
| Pfam | 58 | 461 | 404 | 9.50E-191 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactoside 2-alpha-L-fucosyltransferase activity | Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis. |
Expression pattern of Lj1g3v0524380.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0524380.2, powered by CORGI.
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