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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0605120 |
| Transcript ID | Lj1g3v0605120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 5-like [Glycine max] gi|356515798|ref|XP_003526585.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 9 | 505 | 497 | 0 | – | |
| PANTHER | 9 | 505 | 497 | 0 | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 39 | 19 | – | – | |
| TIGRFAM | 23 | 482 | 460 | 3.10E-104 | ||
| ProSiteProfiles | 26 | 476 | 451 | 44.832 | ||
| Pfam | 27 | 487 | 461 | 2.30E-108 | ||
| SUPERFAMILY | 28 | 234 | 207 | 9.29E-55 | ||
| PRINTS | 34 | 44 | 11 | 1.70E-26 | ||
| Phobius | 40 | 79 | 40 | – | – | |
| Gene3D | 43 | 224 | 182 | 3.60E-20 | – | |
| CDD | 76 | 473 | 398 | 5.46E-19 | ||
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 80 | 99 | 20 | – | – | |
| Phobius | 100 | 110 | 11 | – | – | |
| Phobius | 111 | 128 | 18 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 129 | 133 | 5 | – | – | |
| Phobius | 134 | 157 | 24 | – | – | |
| PRINTS | 136 | 155 | 20 | 1.70E-26 | ||
| ProSitePatterns | 141 | 166 | 26 | – | ||
| Phobius | 158 | 168 | 11 | – | – | |
| Phobius | 169 | 190 | 22 | – | – | |
| TMHMM | 171 | 190 | 20 | – | – | |
| Phobius | 191 | 195 | 5 | – | – | |
| Phobius | 196 | 219 | 24 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 220 | 282 | 63 | – | – | |
| SUPERFAMILY | 266 | 482 | 217 | 9.29E-55 | ||
| Phobius | 283 | 306 | 24 | – | – | |
| TMHMM | 283 | 305 | 23 | – | – | |
| Gene3D | 285 | 478 | 194 | 1.10E-15 | – | |
| PRINTS | 293 | 303 | 11 | 1.70E-26 | ||
| Phobius | 307 | 317 | 11 | – | – | |
| Phobius | 318 | 341 | 24 | – | – | |
| TMHMM | 318 | 340 | 23 | – | – | |
| Phobius | 342 | 347 | 6 | – | – | |
| Phobius | 348 | 371 | 24 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 372 | 382 | 11 | – | – | |
| Phobius | 383 | 404 | 22 | – | – | |
| TMHMM | 385 | 407 | 23 | – | – | |
| PRINTS | 389 | 410 | 22 | 1.70E-26 | ||
| Phobius | 405 | 424 | 20 | – | – | |
| PRINTS | 412 | 424 | 13 | 1.70E-26 | ||
| TMHMM | 422 | 444 | 23 | – | – | |
| Phobius | 425 | 445 | 21 | – | – | |
| Phobius | 446 | 450 | 5 | – | – | |
| Phobius | 451 | 472 | 22 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 473 | 507 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0605120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0605120.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.