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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0672350 |
| Transcript ID | Lj1g3v0672350.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max] gi|356537932|ref|XP_003537460.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 7 | 7 | 5.60E-98 | – | |
| PANTHER | 1 | 7 | 7 | 5.60E-98 | – | |
| MobiDBLite | 1 | 41 | 41 | – | – | |
| PANTHER | 39 | 343 | 305 | 5.60E-98 | – | |
| PANTHER | 39 | 343 | 305 | 5.60E-98 | – | |
| SUPERFAMILY | 53 | 306 | 254 | 1.44E-59 | ||
| Gene3D | 70 | 154 | 85 | 5.70E-08 | – | |
| Pfam | 72 | 277 | 206 | 3.20E-26 | ||
| SMART | 74 | 231 | 158 | 4.40E-07 | ||
| ProSiteProfiles | 78 | 281 | 204 | 23.934 | ||
| Gene3D | 172 | 239 | 68 | 9.40E-13 | – | |
| Gene3D | 339 | 406 | 68 | 4.50E-28 | ||
| SUPERFAMILY | 339 | 407 | 69 | 3.26E-19 | ||
| Pfam | 349 | 406 | 58 | 4.90E-23 | ||
| SMART | 349 | 408 | 60 | 1.30E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Molecular function | Ubiquitin protein ligase binding | Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins. |
Expression pattern of Lj1g3v0672350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0672350.1, powered by CORGI.
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