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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0861760 |
| Transcript ID | Lj1g3v0861760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-galactosidase 16-like [Glycine max] gi|356507642|ref|XP_003522573.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 703 | 703 | 0 | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 1 | 703 | 703 | 0 | ||
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 16 | 27 | 12 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Gene3D | 32 | 352 | 321 | 3.80E-113 | ||
| SUPERFAMILY | 33 | 351 | 319 | 6.84E-92 | ||
| Phobius | 33 | 703 | 671 | – | – | |
| Pfam | 41 | 347 | 307 | 9.50E-105 | ||
| PRINTS | 45 | 62 | 18 | 2.50E-63 | ||
| PRINTS | 66 | 84 | 19 | 2.50E-63 | ||
| PRINTS | 121 | 140 | 20 | 2.50E-63 | ||
| PRINTS | 178 | 193 | 16 | 2.50E-63 | ||
| ProSitePatterns | 180 | 192 | 13 | – | ||
| PRINTS | 259 | 274 | 16 | 2.50E-63 | ||
| PRINTS | 296 | 311 | 16 | 2.50E-63 | ||
| PRINTS | 315 | 331 | 17 | 2.50E-63 | ||
| SUPERFAMILY | 409 | 568 | 160 | 1.11E-11 | ||
| SUPERFAMILY | 579 | 701 | 123 | 2.34E-26 | ||
| Gene3D | 612 | 696 | 85 | 1.10E-09 | ||
| PRINTS | 612 | 626 | 15 | 2.50E-63 | ||
| PRINTS | 639 | 655 | 17 | 2.50E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj1g3v0861760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0861760.1, powered by CORGI.
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