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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0913340 |
| Transcript ID | Lj1g3v0913340.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WAT1-related protein At1g70260-like [Cicer arietinum] gi|502136178|ref|XP_004502587.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 281 | 281 | 3.80E-169 | ||
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 16 | 16 | – | – | |
| PANTHER | 1 | 281 | 281 | 3.80E-169 | – | |
| SUPERFAMILY | 2 | 79 | 78 | 2.88E-05 | – | |
| Phobius | 3 | 11 | 9 | – | – | |
| TMHMM | 4 | 21 | 18 | – | – | |
| Phobius | 12 | 16 | 5 | – | – | |
| Phobius | 17 | 25 | 9 | – | – | |
| TMHMM | 26 | 48 | 23 | – | – | |
| Phobius | 26 | 48 | 23 | – | – | |
| Phobius | 49 | 59 | 11 | – | – | |
| Phobius | 60 | 80 | 21 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 81 | 106 | 26 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 107 | 128 | 22 | – | – | |
| Pfam | 111 | 249 | 139 | 4.00E-09 | ||
| Phobius | 129 | 143 | 15 | – | – | |
| TMHMM | 143 | 162 | 20 | – | – | |
| Phobius | 144 | 162 | 19 | – | – | |
| Phobius | 163 | 176 | 14 | – | – | |
| TMHMM | 175 | 194 | 20 | – | – | |
| Phobius | 177 | 194 | 18 | – | – | |
| Phobius | 195 | 205 | 11 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 206 | 226 | 21 | – | – | |
| Phobius | 227 | 231 | 5 | – | – | |
| Phobius | 232 | 251 | 20 | – | – | |
| TMHMM | 233 | 250 | 18 | – | – | |
| Phobius | 252 | 281 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0913340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0913340.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.