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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1091290 |
| Transcript ID | Lj1g3v1091290.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|145334817|ref|NP_001078754.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 259 | 251 | 3.50E-250 | – | |
| PANTHER | 9 | 259 | 251 | 3.50E-250 | – | |
| SUPERFAMILY | 27 | 247 | 221 | 2.22E-26 | ||
| Pfam | 38 | 276 | 239 | 4.40E-06 | ||
| Gene3D | 64 | 230 | 167 | 8.20E-11 | ||
| SUPERFAMILY | 262 | 381 | 120 | 1.66E-10 | ||
| Gene3D | 312 | 375 | 64 | 8.60E-10 | ||
| PANTHER | 320 | 371 | 52 | 3.50E-250 | – | |
| PANTHER | 320 | 371 | 52 | 3.50E-250 | – | |
| ProSiteProfiles | 346 | 381 | 36 | 10.943 | ||
| SMART | 350 | 378 | 29 | 0.0095 | ||
| ProSitePatterns | 359 | 371 | 13 | – | ||
| PANTHER | 397 | 445 | 49 | 3.50E-250 | – | |
| PANTHER | 397 | 445 | 49 | 3.50E-250 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj1g3v1091290.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1091290.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.