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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1318280 |
| Transcript ID | Lj1g3v1318280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cation proton exchanger [Medicago truncatula] gi|357519983|ref|XP_003630280.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 6 | 806 | 801 | 0 | – | |
| PANTHER | 6 | 806 | 801 | 0 | – | |
| Phobius | 35 | 56 | 22 | – | – | |
| TMHMM | 37 | 56 | 20 | – | – | |
| Pfam | 44 | 425 | 382 | 1.00E-57 | ||
| Phobius | 57 | 62 | 6 | – | – | |
| Phobius | 63 | 80 | 18 | – | – | |
| TMHMM | 63 | 80 | 18 | – | – | |
| Phobius | 81 | 99 | 19 | – | – | |
| TMHMM | 95 | 117 | 23 | – | – | |
| Phobius | 100 | 117 | 18 | – | – | |
| Phobius | 118 | 128 | 11 | – | – | |
| Phobius | 129 | 152 | 24 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 153 | 163 | 11 | – | – | |
| TMHMM | 162 | 184 | 23 | – | – | |
| Phobius | 164 | 185 | 22 | – | – | |
| Phobius | 186 | 196 | 11 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 197 | 220 | 24 | – | – | |
| Phobius | 221 | 231 | 11 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 232 | 255 | 24 | – | – | |
| Phobius | 256 | 266 | 11 | – | – | |
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 267 | 286 | 20 | – | – | |
| Phobius | 287 | 291 | 5 | – | – | |
| Phobius | 292 | 311 | 20 | – | – | |
| Phobius | 312 | 317 | 6 | – | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| Phobius | 318 | 339 | 22 | – | – | |
| Phobius | 340 | 344 | 5 | – | – | |
| Phobius | 345 | 370 | 26 | – | – | |
| TMHMM | 346 | 368 | 23 | – | – | |
| Phobius | 371 | 376 | 6 | – | – | |
| Phobius | 377 | 397 | 21 | – | – | |
| TMHMM | 378 | 397 | 20 | – | – | |
| Phobius | 398 | 408 | 11 | – | – | |
| Phobius | 409 | 431 | 23 | – | – | |
| TMHMM | 409 | 431 | 23 | – | – | |
| Phobius | 432 | 835 | 404 | – | – | |
| Gene3D | 485 | 606 | 122 | 3.10E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1318280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1318280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.