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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1330390 |
| Transcript ID | Lj1g3v1330390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cation/H(+) antiporter 15-like [Glycine max] gi|356507460|ref|XP_003522484.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 378 | 378 | 2.00E-238 | – | |
| PANTHER | 1 | 378 | 378 | 2.00E-238 | – | |
| Pfam | 2 | 212 | 211 | 3.80E-26 | ||
| TMHMM | 16 | 38 | 23 | – | – | |
| Phobius | 20 | 44 | 25 | – | – | |
| Phobius | 45 | 55 | 11 | – | – | |
| TMHMM | 53 | 72 | 20 | – | – | |
| Phobius | 56 | 75 | 20 | – | – | |
| Phobius | 76 | 80 | 5 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 81 | 100 | 20 | – | – | |
| Phobius | 101 | 106 | 6 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 107 | 128 | 22 | – | – | |
| Phobius | 129 | 133 | 5 | – | – | |
| Phobius | 134 | 159 | 26 | – | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| Phobius | 160 | 165 | 6 | – | – | |
| Phobius | 166 | 186 | 21 | – | – | |
| Phobius | 187 | 197 | 11 | – | – | |
| Phobius | 198 | 220 | 23 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 221 | 378 | 158 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1330390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1330390.1, powered by CORGI.
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