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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1380930 |
| Transcript ID | Lj1g3v1380930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: target of Myb protein 1-like [Cicer arietinum] gi|502137213|ref|XP_004503010.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 6.60E-220 | – | |
| PANTHER | 1 | 398 | 398 | 6.60E-220 | – | |
| SMART | 2 | 134 | 133 | 4.20E-29 | ||
| CDD | 2 | 130 | 129 | 2.03E-36 | – | |
| SUPERFAMILY | 4 | 139 | 136 | 6.25E-35 | ||
| Gene3D | 4 | 139 | 136 | 1.00E-33 | ||
| Pfam | 5 | 111 | 107 | 7.40E-22 | ||
| ProSiteProfiles | 9 | 138 | 130 | 33.209 | ||
| MobiDBLite | 141 | 186 | 46 | – | – | |
| SUPERFAMILY | 151 | 270 | 120 | 2.88E-18 | – | |
| ProSiteProfiles | 180 | 268 | 89 | 13.432 | ||
| CDD | 188 | 266 | 79 | 1.54E-29 | – | |
| Gene3D | 189 | 269 | 81 | 5.50E-13 | ||
| Coils | 189 | 209 | 21 | – | – | |
| Pfam | 194 | 268 | 75 | 1.30E-11 | ||
| MobiDBLite | 291 | 442 | 152 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
Expression pattern of Lj1g3v1380930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1380930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.