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Lj1g3v1386650.2

Overview

Field Value
Gene ID Lj1g3v1386650
Transcript ID Lj1g3v1386650.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description NADPH oxidase [Phaseolus vulgaris] gi|371767605|gb|AEX56133.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11972
31 292 262 1.10E-142 –
PANTHER
PTHR11972:SF64
31 292 262 1.10E-142 –
Pfam
PF08414
75 175 101 8.50E-36
IPR013623
SUPERFAMILY
SSF47473
100 249 150 1.84E-19
IPR011992
Gene3D
G3DSA:1.10.238.10
103 245 143 4.90E-16
IPR011992
ProSiteProfiles
PS50222
172 207 36 11.222
IPR002048
ProSitePatterns
PS00018
185 197 13 –
IPR018247
ProSiteProfiles
PS50222
216 251 36 8.404
IPR002048

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004601
Molecular function Peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
Subterm of
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0050664
Molecular function Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 24

Expression data

Expression pattern

Expression pattern of Lj1g3v1386650.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1386650.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.