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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1476250 |
| Transcript ID | Lj1g3v1476250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: bidirectional sugar transporter SWEET12-like [Glycine max] gi|356516515|ref|XP_003526939.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 292 | 292 | 2.00E-165 | ||
| PANTHER | 1 | 292 | 292 | 2.00E-165 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| Pfam | 10 | 95 | 86 | 3.80E-25 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| Phobius | 34 | 44 | 11 | – | – | |
| TMHMM | 44 | 63 | 20 | – | – | |
| Phobius | 45 | 63 | 19 | – | – | |
| Phobius | 64 | 68 | 5 | – | – | |
| TMHMM | 68 | 90 | 23 | – | – | |
| Phobius | 69 | 91 | 23 | – | – | |
| Phobius | 92 | 102 | 11 | – | – | |
| Phobius | 103 | 120 | 18 | – | – | |
| TMHMM | 103 | 122 | 20 | – | – | |
| Phobius | 121 | 131 | 11 | – | – | |
| TMHMM | 132 | 151 | 20 | – | – | |
| Pfam | 132 | 216 | 85 | 2.30E-28 | ||
| Phobius | 132 | 151 | 20 | – | – | |
| Phobius | 152 | 162 | 11 | – | – | |
| Phobius | 163 | 184 | 22 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 185 | 189 | 5 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 190 | 212 | 23 | – | – | |
| Phobius | 213 | 301 | 89 | – | – | |
| MobiDBLite | 222 | 301 | 80 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj1g3v1476250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1476250.1, powered by CORGI.
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