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Lj1g3v1486360.1

Overview

Field Value
Gene ID Lj1g3v1486360
Transcript ID Lj1g3v1486360.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: HVA22-like protein e-like isoform X1 [Cicer arietinum] gi|502133318|ref|XP_004501718.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 104 104 2.20E-56
PANTHER 1 104 104 2.20E-56
Phobius 1 11 11
TMHMM 10 32 23
Phobius 12 32 21
Pfam 24 98 75 4.10E-27
Phobius 33 43 11
TMHMM 43 60 18
Phobius 44 63 20
Phobius 64 74 11
Phobius 75 94 20
TMHMM 75 97 23
Phobius 95 152 58
MobiDBLite 107 152 46

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Response to abscisic acid Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj1g3v1486360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1486360.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.