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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1526050 |
| Transcript ID | Lj1g3v1526050.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12 [Glycine max] gi|356508053|ref|XP_003522776.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | – | – | |
| PANTHER | 24 | 504 | 481 | 0 | – | |
| PANTHER | 24 | 504 | 481 | 0 | – | |
| CDD | 48 | 482 | 435 | 7.78E-157 | – | |
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 52 | 73 | 22 | – | – | |
| TIGRFAM | 58 | 454 | 397 | 1.80E-71 | ||
| Pfam | 58 | 218 | 161 | 5.20E-31 | ||
| Phobius | 74 | 84 | 11 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 85 | 113 | 29 | – | – | |
| Phobius | 114 | 133 | 20 | – | – | |
| TMHMM | 133 | 155 | 23 | – | – | |
| Phobius | 134 | 155 | 22 | – | – | |
| Phobius | 156 | 166 | 11 | – | – | |
| Phobius | 167 | 188 | 22 | – | – | |
| TMHMM | 170 | 188 | 19 | – | – | |
| Phobius | 189 | 199 | 11 | – | – | |
| Phobius | 200 | 221 | 22 | – | – | |
| TMHMM | 201 | 223 | 23 | – | – | |
| Phobius | 222 | 226 | 5 | – | – | |
| Phobius | 227 | 251 | 25 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Phobius | 252 | 271 | 20 | – | – | |
| Phobius | 272 | 290 | 19 | – | – | |
| TMHMM | 273 | 295 | 23 | – | – | |
| Pfam | 280 | 440 | 161 | 2.00E-25 | ||
| Phobius | 291 | 309 | 19 | – | – | |
| Phobius | 310 | 329 | 20 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 330 | 348 | 19 | – | – | |
| Phobius | 349 | 372 | 24 | – | – | |
| TMHMM | 353 | 372 | 20 | – | – | |
| Phobius | 373 | 391 | 19 | – | – | |
| Phobius | 392 | 415 | 24 | – | – | |
| TMHMM | 394 | 416 | 23 | – | – | |
| Phobius | 416 | 421 | 6 | – | – | |
| Phobius | 422 | 446 | 25 | – | – | |
| TMHMM | 423 | 445 | 23 | – | – | |
| Phobius | 447 | 451 | 5 | – | – | |
| TMHMM | 450 | 472 | 23 | – | – | |
| Phobius | 452 | 474 | 23 | – | – | |
| Phobius | 475 | 505 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1526050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1526050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.