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Lj1g3v1526260.1

Overview

Field Value
Gene ID Lj1g3v1526260
Transcript ID Lj1g3v1526260.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase PEPKR2-like [Glycine max] gi|356510139|ref|XP_003523797.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24349
38 373 336 1.40E-239 –
PANTHER
PTHR24349:SF102
38 373 336 1.40E-239 –
Gene3D
G3DSA:3.30.200.20
95 195 101 1.10E-24 –
SUPERFAMILY
SSF56112
96 369 274 1.20E-82
IPR011009
CDD
cd05117
104 352 249 1.95E-113 –
SMART
SM00220
105 353 249 3.40E-93
IPR000719
ProSiteProfiles
PS50011
105 353 249 48.767
IPR000719
Pfam
PF00069
106 353 248 1.20E-67
IPR000719
ProSitePatterns
PS00107
111 134 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
196 364 169 9.30E-61 –
ProSitePatterns
PS00108
218 230 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v1526260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1526260.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.