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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1572510 |
| Transcript ID | Lj1g3v1572510.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein CutA, chloroplastic-like isoform X2 [Cicer arietinum] gi|502133020|ref|XP_004501622.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 27 | 9 | – | – | |
| PANTHER | 25 | 181 | 157 | 2.20E-93 | – | |
| PANTHER | 25 | 181 | 157 | 2.20E-93 | ||
| Phobius | 28 | 45 | 18 | – | – | |
| Phobius | 46 | 181 | 136 | – | – | |
| Gene3D | 73 | 181 | 109 | 8.50E-44 | – | |
| SUPERFAMILY | 79 | 180 | 102 | 1.89E-35 | ||
| Pfam | 80 | 177 | 98 | 8.70E-38 | ||
| Coils | 175 | 181 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to metal ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus. |
Expression pattern of Lj1g3v1572510.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1572510.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.