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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1625450 |
| Transcript ID | Lj1g3v1625450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | cytochrome b6f complex subunit [Arabidopsis thaliana] gi|3090403|emb|CAA06667.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 2 | 131 | 130 | 5.30E-54 | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 97 | 77 | – | – | |
| Hamap | 94 | 125 | 32 | 13.711 | ||
| SUPERFAMILY | 95 | 125 | 31 | 7.85E-11 | – | |
| Pfam | 96 | 123 | 28 | 1.00E-10 | ||
| Phobius | 98 | 120 | 23 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 121 | 132 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytochrome b6f complex | Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species. |
Expression pattern of Lj1g3v1625450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1625450.1, powered by CORGI.
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