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Lj1g3v1781090.1

Overview

Field Value
Gene ID Lj1g3v1781090
Transcript ID Lj1g3v1781090.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Lipases,hydrolases, acting on ester bonds isoform 2 [Theobroma cacao] gi|508723739|gb|EOY15636.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 27 27
Phobius 1 3 3
TMHMM 2 24 23
Phobius 4 19 16
Pfam 9 74 66 3.70E-13
PANTHER 12 302 291 6.40E-171
PANTHER 12 302 291 6.40E-171
Phobius 20 27 8
Phobius 28 50 23
TMHMM 51 73 23
Phobius 51 73 23
Phobius 74 260 187
Pfam 95 247 153 8.30E-22
Phobius 261 280 20
TMHMM 263 285 23
Phobius 281 320 40

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj1g3v1781090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1781090.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.