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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1929090 |
| Transcript ID | Lj1g3v1929090.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcriptional corepressor LEUNIG-like isoform 2 [Glycine max] gi|356507764|ref|XP_003522634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 571 | 568 | 0 | – | |
| PANTHER | 4 | 571 | 568 | 0 | – | |
| MobiDBLite | 50 | 224 | 175 | – | – | |
| Gene3D | 266 | 570 | 305 | 2.40E-66 | ||
| SMART | 283 | 322 | 40 | 6.30E-05 | ||
| CDD | 287 | 571 | 285 | 9.91E-59 | – | |
| SUPERFAMILY | 287 | 571 | 285 | 5.95E-63 | ||
| ProSiteProfiles | 290 | 571 | 282 | 35.435 | ||
| ProSiteProfiles | 290 | 331 | 42 | 9.64 | ||
| Pfam | 292 | 321 | 30 | 0.0027 | ||
| SMART | 325 | 364 | 40 | 2.10E-09 | ||
| Pfam | 329 | 364 | 36 | 4.40E-06 | ||
| ProSiteProfiles | 332 | 366 | 35 | 14.652 | ||
| ProSitePatterns | 351 | 365 | 15 | – | ||
| SMART | 368 | 408 | 41 | 3.90E-08 | ||
| Pfam | 371 | 408 | 38 | 5.00E-05 | ||
| ProSiteProfiles | 375 | 417 | 43 | 13.516 | ||
| SMART | 450 | 488 | 39 | 6.50E-09 | ||
| Pfam | 453 | 488 | 36 | 5.50E-06 | ||
| ProSiteProfiles | 457 | 489 | 33 | 10.542 | ||
| SMART | 494 | 533 | 40 | 0.52 | ||
| SMART | 535 | 571 | 37 | 12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1929090.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1929090.2, powered by CORGI.
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