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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2063160 |
| Transcript ID | Lj1g3v2063160.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| Gene3D | 7 | 49 | 43 | 7.60E-14 | ||
| ProSiteProfiles | 7 | 60 | 54 | 9.365 | ||
| SUPERFAMILY | 8 | 50 | 43 | 4.71E-12 | ||
| PANTHER | 8 | 349 | 342 | 1.20E-82 | – | |
| PANTHER | 8 | 349 | 342 | 1.20E-82 | – | |
| Pfam | 9 | 45 | 37 | 2.60E-07 | ||
| SMART | 13 | 54 | 42 | 0.0075 | ||
| Phobius | 16 | 27 | 12 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Phobius | 33 | 349 | 317 | – | – | |
| Gene3D | 111 | 302 | 192 | 7.60E-14 | ||
| SUPERFAMILY | 132 | 299 | 168 | 2.24E-10 | – | |
| Pfam | 315 | 349 | 35 | 2.50E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2063160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2063160.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.