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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2063200 |
| Transcript ID | Lj1g3v2063200.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TOM1-like protein 1-like [Glycine max] gi|356507893|ref|XP_003522697.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 399 | 399 | 0 | – | |
| PANTHER | 1 | 399 | 399 | 0 | – | |
| SMART | 2 | 134 | 133 | 2.50E-53 | ||
| SUPERFAMILY | 3 | 138 | 136 | 1.05E-44 | ||
| Gene3D | 3 | 138 | 136 | 8.40E-46 | ||
| Pfam | 4 | 123 | 120 | 2.50E-30 | ||
| CDD | 5 | 130 | 126 | 2.62E-55 | – | |
| ProSiteProfiles | 9 | 138 | 130 | 43.687 | ||
| SUPERFAMILY | 141 | 269 | 129 | 1.41E-27 | – | |
| MobiDBLite | 160 | 182 | 23 | – | – | |
| ProSiteProfiles | 180 | 268 | 89 | 16.783 | ||
| Gene3D | 186 | 269 | 84 | 4.60E-21 | ||
| CDD | 188 | 266 | 79 | 2.38E-29 | – | |
| Pfam | 194 | 268 | 75 | 8.60E-17 | ||
| MobiDBLite | 267 | 339 | 73 | – | – | |
| PANTHER | 418 | 603 | 186 | 0 | – | |
| PANTHER | 418 | 603 | 186 | 0 | – | |
| MobiDBLite | 431 | 496 | 66 | – | – | |
| MobiDBLite | 616 | 658 | 43 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
Expression pattern of Lj1g3v2063200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2063200.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.