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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2096220 |
| Transcript ID | Lj1g3v2096220.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Multidrug and toxin extrusion protein [Medicago truncatula] gi|357490223|ref|XP_003615399.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 57 | 57 | – | – | |
| PANTHER | 19 | 514 | 496 | 0 | – | |
| PANTHER | 19 | 514 | 496 | 0 | – | |
| CDD | 47 | 483 | 437 | 1.53E-175 | – | |
| Pfam | 57 | 217 | 161 | 3.00E-37 | ||
| Phobius | 58 | 79 | 22 | – | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| TIGRFAM | 67 | 454 | 388 | 9.10E-67 | ||
| Phobius | 80 | 84 | 5 | – | – | |
| TMHMM | 84 | 106 | 23 | – | – | |
| Phobius | 85 | 107 | 23 | – | – | |
| Phobius | 108 | 127 | 20 | – | – | |
| TMHMM | 127 | 149 | 23 | – | – | |
| Phobius | 128 | 147 | 20 | – | – | |
| Phobius | 148 | 166 | 19 | – | – | |
| Phobius | 167 | 187 | 21 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 188 | 198 | 11 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 199 | 220 | 22 | – | – | |
| Phobius | 221 | 225 | 5 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 226 | 250 | 25 | – | – | |
| Phobius | 251 | 270 | 20 | – | – | |
| TMHMM | 268 | 290 | 23 | – | – | |
| Phobius | 271 | 290 | 20 | – | – | |
| Pfam | 278 | 440 | 163 | 4.50E-37 | ||
| Phobius | 291 | 309 | 19 | – | – | |
| TMHMM | 305 | 327 | 23 | – | – | |
| Phobius | 310 | 331 | 22 | – | – | |
| Phobius | 332 | 351 | 20 | – | – | |
| TMHMM | 349 | 371 | 23 | – | – | |
| Phobius | 352 | 374 | 23 | – | – | |
| Phobius | 375 | 385 | 11 | – | – | |
| TMHMM | 386 | 403 | 18 | – | – | |
| Phobius | 386 | 405 | 20 | – | – | |
| Phobius | 406 | 425 | 20 | – | – | |
| TMHMM | 424 | 446 | 23 | – | – | |
| Phobius | 426 | 446 | 21 | – | – | |
| Phobius | 447 | 451 | 5 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 452 | 473 | 22 | – | – | |
| Phobius | 474 | 540 | 67 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2096220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2096220.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.