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Lj1g3v2096240.1

Overview

Field Value
Gene ID Lj1g3v2096240
Transcript ID Lj1g3v2096240.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description beta-1,3-glucuronosyltransferase [Lotus japonicus] gi|63087716|emb|CAI93173.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 67 67 – –
PANTHER
PTHR10896:SF20
25 391 367 1.60E-208 –
PANTHER
PTHR10896
25 391 367 1.60E-208
IPR005027
Phobius
TRANSMEMBRANE
68 92 25 – –
TMHMM
TMhelix
68 90 23 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
93 391 299 – –
Gene3D
G3DSA:3.90.550.10
145 390 246 1.10E-94
IPR029044
CDD
cd00218
146 375 230 2.13E-98
IPR005027
SUPERFAMILY
SSF53448
147 390 244 2.25E-83
IPR029044
Pfam
PF03360
167 374 208 2.90E-71
IPR005027

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0015018
Molecular function Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein.
Subterm of
GO:0016020
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v2096240.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2096240.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.