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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2156580 |
| Transcript ID | Lj1g3v2156580.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription factor E2FB-like [Glycine max] gi|356539215|ref|XP_003538095.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 383 | 383 | 1.70E-164 | – | |
| MobiDBLite | 1 | 83 | 83 | – | – | |
| PANTHER | 1 | 383 | 383 | 1.70E-164 | ||
| Gene3D | 92 | 160 | 69 | 7.40E-29 | ||
| SMART | 94 | 159 | 66 | 2.00E-34 | ||
| SUPERFAMILY | 94 | 157 | 64 | 2.72E-17 | ||
| Pfam | 96 | 159 | 64 | 9.00E-25 | ||
| Coils | 110 | 130 | 21 | – | – | |
| CDD | 170 | 276 | 107 | 1.52E-43 | ||
| SUPERFAMILY | 173 | 276 | 104 | 3.66E-31 | – | |
| Pfam | 176 | 274 | 99 | 3.30E-31 | ||
| Coils | 179 | 206 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Transcription factor complex | A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of Lj1g3v2156580.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2156580.2, powered by CORGI.
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