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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003316
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.423s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0259819.1
n.a. PREDICTED: transcription factor-like protein DPB-like [Glycine max] gi|356497355|ref|XP_003517526.1| chr0 135030262 135036011 -
3 domain predictions
3 GO terms
Lj0g3v0259819.2
n.a. PREDICTED: transcription factor-like protein DPB-like [Glycine max] gi|356497355|ref|XP_003517526.1| chr0 135030427 135036011 -
3 domain predictions
3 GO terms
Lj0g3v0292459.1
n.a. PREDICTED: transcription factor-like protein DPB-like [Cucumis sativus] gi|449438797|ref|XP_004137174.1| chr0 151802601 151806360 -
3 domain predictions
3 GO terms
Lj1g3v0415900.1
n.a. PREDICTED: E2F transcription factor-like E2FE-like [Glycine max] gi|356516714|ref|XP_003527038.1| chr1 5562919 5567144 -
3 domain predictions
3 GO terms
Lj1g3v2156580.2
n.a. PREDICTED: transcription factor E2FB-like [Glycine max] gi|356539215|ref|XP_003538095.1| chr1 26038105 26044050 +
3 domain predictions
3 GO terms
Lj3g3v2949670.1
n.a. PREDICTED: transcription factor E2FB-like isoform X2 [Cicer arietinum] gi|502145866|ref|XP_004506214.1| chr3 36802114 36805996 +
3 domain predictions
3 GO terms
Lj3g3v2949670.2
n.a. PREDICTED: transcription factor E2FB-like isoform X2 [Cicer arietinum] gi|502145866|ref|XP_004506214.1| chr3 36802114 36806807 +
3 domain predictions
3 GO terms
Lj4g3v1561700.1
n.a. PREDICTED: E2F transcription factor-like E2FE-like isoform X1 [Cicer arietinum] gi|502152216|ref|XP_004508820.1| chr4 23267879 23272243 -
3 domain predictions
3 GO terms
Lj5g3v0816340.1
n.a. PREDICTED: transcription factor E2FA-like [Cicer arietinum] gi|502122297|ref|XP_004497676.1| chr5 11666592 11671507 -
3 domain predictions
3 GO terms
LotjaGi1g1v0184200.1
n.a. E2F transcription factor; TAIR: AT3G48160.2 DP-E2F-like 1; Swiss-Prot: sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE; TrEMBL-Plants: tr|A0A0S3RGB4|A0A0S3RGB4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0184200 LjG1.1_chr1 36043233 36047921 -
3 domain predictions
3 GO terms
LotjaGi1g1v0205000.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205000 LjG1.1_chr1 44306403 44310233 +
3 domain predictions
3 GO terms
LotjaGi1g1v0205100.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319380 44333436 +
3 domain predictions
3 GO terms
LotjaGi1g1v0205100.2
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319438 44333123 +
3 domain predictions
3 GO terms
LotjaGi1g1v0428700.1
n.a. Transcription factor; TAIR: AT1G47870.1 winged-helix DNA-binding transcription factor family protein; Swiss-Prot: sp|Q9FV70|E2FC_ARATH Transcription factor E2FC; TrEMBL-Plants: tr|A0A151TCJ9|A0A151TCJ9_CAJCA Transcription factor E2F4; Found in the gene: LotjaGi1g1v0428700 LjG1.1_chr1 92370291 92375112 -
3 domain predictions
3 GO terms
LotjaGi3g1v0181200.2
n.a. Transcription factor; TAIR: AT5G22220.2 E2F transcription factor 1; Swiss-Prot: sp|Q9FV71|E2FB_ARATH Transcription factor E2FB; TrEMBL-Plants: tr|K7LQ43|K7LQ43_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0181200 LjG1.1_chr3 25229354 25236830 -
3 domain predictions
3 GO terms
LotjaGi3g1v0472800.1
n.a. Transcription factor; TAIR: AT5G22220.2 E2F transcription factor 1; Swiss-Prot: sp|Q9FV71|E2FB_ARATH Transcription factor E2FB; TrEMBL-Plants: tr|K7LQ43|K7LQ43_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0472800 LjG1.1_chr3 88995617 89001217 +
3 domain predictions
3 GO terms
LotjaGi4g1v0140500.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi4g1v0140500 LjG1.1_chr4 21225633 21240494 -
3 domain predictions
3 GO terms
LotjaGi4g1v0236800.1
n.a. E2F transcription factor; TAIR: AT3G48160.2 DP-E2F-like 1; Swiss-Prot: sp|Q8LSZ4|E2FE_ARATH E2F transcription factor-like E2FE; TrEMBL-Plants: tr|A0A151R8W6|A0A151R8W6_CAJCA Transcription factor E2F7; Found in the gene: LotjaGi4g1v0236800 LjG1.1_chr4 55161128 55165521 +
3 domain predictions
3 GO terms
LotjaGi5g1v0102600.2
n.a. Transcription factor; TAIR: AT2G36010.1 E2F transcription factor 3; Swiss-Prot: sp|Q9FNY0|E2FA_ARATH Transcription factor E2FA; TrEMBL-Plants: tr|V7BL69|V7BL69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0102600 LjG1.1_chr5 18569475 18574349 -
3 domain predictions
3 GO terms