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Lj1g3v2379130.3

Overview

Field Value
Gene ID Lj1g3v2379130
Transcript ID Lj1g3v2379130.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Integrator complex subunit [Medicago truncatula] gi|357506205|ref|XP_003623391.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 22 22 – –
SUPERFAMILY
SSF48371
29 82 54 2.55E-27
IPR016024
Gene3D
G3DSA:1.25.10.10
54 258 205 6.40E-06
IPR011989
PANTHER
PTHR20938:SF0
101 517 417 2.50E-187 –
PANTHER
PTHR20938
101 517 417 2.50E-187 –
SUPERFAMILY
SSF48371
139 253 115 2.55E-27
IPR016024
SUPERFAMILY
SSF48371
280 522 243 2.55E-27
IPR016024
Gene3D
G3DSA:1.25.10.10
289 418 130 3.00E-10
IPR011989
CDD
cd00020
296 360 65 0.00220633 –
PANTHER
PTHR20938
557 889 333 2.50E-187 –
PANTHER
PTHR20938:SF0
557 889 333 2.50E-187 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 22

Expression data

Expression pattern

Expression pattern of Lj1g3v2379130.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2379130.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.