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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2581040 |
| Transcript ID | Lj1g3v2581040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein cornichon homolog 4-like [Glycine max] gi|356532099|ref|XP_003534611.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 134 | 134 | 4.70E-72 | – | |
| PANTHER | 1 | 134 | 134 | 4.70E-72 | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SMART | 4 | 125 | 122 | 1.90E-46 | ||
| Pfam | 5 | 123 | 119 | 9.90E-36 | ||
| Phobius | 5 | 26 | 22 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 27 | 52 | 26 | – | – | |
| Phobius | 53 | 81 | 29 | – | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 82 | 109 | 28 | – | – | |
| Phobius | 110 | 131 | 22 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 132 | 136 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj1g3v2581040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2581040.1, powered by CORGI.
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