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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003377
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.504s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0096719.1
n.a. PREDICTED: protein cornichon homolog 1-like [Glycine max] gi|356500457|ref|XP_003519048.1| chr0 40822171 40833598 -
3 domain predictions
1 GO term
Lj1g3v2581040.1
n.a. PREDICTED: protein cornichon homolog 4-like [Glycine max] gi|356532099|ref|XP_003534611.1| chr1 29642836 29646289 +
3 domain predictions
1 GO term
Lj2g3v2002660.1
n.a. PREDICTED: protein cornichon homolog 4-like [Cicer arietinum] gi|502160129|ref|XP_004511643.1| chr2 30402508 30404446 +
3 domain predictions
1 GO term
Lj4g3v1290620.1
n.a. PREDICTED: protein cornichon homolog 4-like [Cicer arietinum] gi|502175890|ref|XP_004515760.1| chr4 19105893 19109115 +
3 domain predictions
1 GO term
LotjaGi1g1v0462700.1
n.a. Cornichon family protein; TAIR: AT1G12390.1 Cornichon family protein; Swiss-Prot: sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4; TrEMBL-Plants: tr|I3SXC4|I3SXC4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0462700 LjG1.1_chr1 96703464 96707301 +
3 domain predictions
1 GO term
LotjaGi1g1v0462700.2
n.a. Cornichon family protein; TAIR: AT1G12390.1 Cornichon family protein; Swiss-Prot: sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4; TrEMBL-Plants: tr|I3SXC4|I3SXC4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0462700 LjG1.1_chr1 96703635 96706400 +
3 domain predictions
1 GO term
LotjaGi2g1v0427600.1
n.a. Cornichon family protein; TAIR: AT1G12390.1 Cornichon family protein; Swiss-Prot: sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4; TrEMBL-Plants: tr|I3SV64|I3SV64_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0427600 LjG1.1_chr2 92485312 92488338 +
3 domain predictions
1 GO term
LotjaGi4g1v0212400.1
n.a. Cornichon family protein; TAIR: AT1G12390.1 Cornichon family protein; Swiss-Prot: sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4; TrEMBL-Plants: tr|I3T8Z8|I3T8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0212400 LjG1.1_chr4 49451326 49455513 -
3 domain predictions
1 GO term
LotjaGi4g1v0212400.2
n.a. Cornichon family protein; TAIR: AT1G12340.1 Cornichon family protein; Swiss-Prot: sp|Q3EDD7|CNIH2_ARATH Probable protein cornichon homolog 2; TrEMBL-Plants: tr|I3T8Z8|I3T8Z8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0212400 LjG1.1_chr4 49451914 49454547 -
3 domain predictions
1 GO term
LotjaGi5g1v0145500.1
n.a. Cornichon family protein; TAIR: AT3G12180.1 Cornichon family protein; Swiss-Prot: sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1; TrEMBL-Plants: tr|I3TAE6|I3TAE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0145500 LjG1.1_chr5 36942343 36955883 +
3 domain predictions
1 GO term
LotjaGi5g1v0145500.2
n.a. Cornichon family protein; TAIR: AT3G12180.1 Cornichon family protein; Swiss-Prot: sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1; TrEMBL-Plants: tr|I3TAE6|I3TAE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0145500 LjG1.1_chr5 36942511 36949432 +
3 domain predictions
1 GO term
LotjaGi5g1v0145500.3
n.a. Cornichon family protein; TAIR: AT3G12180.1 Cornichon family protein; Swiss-Prot: sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1; TrEMBL-Plants: tr|K7LIA5|K7LIA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0145500 LjG1.1_chr5 36942511 36949514 +
3 domain predictions
1 GO term
LotjaGi5g1v0145500.4
n.a. Cornichon family protein; TAIR: AT3G12180.1 Cornichon family protein; Swiss-Prot: sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1; TrEMBL-Plants: tr|I3TAE6|I3TAE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0145500 LjG1.1_chr5 36942511 36949514 +
3 domain predictions
1 GO term