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Lj1g3v2627550.1

Overview

Field Value
Gene ID Lj1g3v2627550
Transcript ID Lj1g3v2627550.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: bifunctional protein FolD-like [Cicer arietinum] gi|502105032|ref|XP_004492706.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 19 19 – –
PANTHER
PTHR10025
51 352 302 7.80E-204 –
SUPERFAMILY
SSF53223
61 180 120 8.82E-41 –
Hamap
MF_01576
61 349 289 37.632
IPR000672
Pfam
PF00763
63 179 117 1.10E-40
IPR020630
Gene3D
G3DSA:3.40.192.10
65 199 135 2.20E-51 –
PRINTS
PR00085
92 114 23 7.80E-83
IPR000672
PRINTS
PR00085
133 160 28 7.80E-83
IPR000672
ProSitePatterns
PS00766
134 159 26 –
IPR020867
PRINTS
PR00085
168 189 22 7.80E-83
IPR000672
CDD
cd01080
174 346 173 1.55E-95 –
SUPERFAMILY
SSF51735
181 346 166 1.53E-54
IPR016040
Pfam
PF02882
182 347 166 5.50E-67
IPR020631
Gene3D
G3DSA:3.40.50.720
200 330 131 4.20E-56
IPR016040
PRINTS
PR00085
215 235 21 7.80E-83
IPR000672
PRINTS
PR00085
264 293 30 7.80E-83
IPR000672
PRINTS
PR00085
305 321 17 7.80E-83
IPR000672
PRINTS
PR00085
322 340 19 7.80E-83
IPR000672
ProSitePatterns
PS00767
326 334 9 –
IPR020867

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004488
Molecular function Methylenetetrahydrofolate dehydrogenase (NADP+) activity Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj1g3v2627550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2627550.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.