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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2627640 |
| Transcript ID | Lj1g3v2627640.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Glycine max] gi|356532026|ref|XP_003534575.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 506 | 506 | – | – | |
| Coils | 154 | 174 | 21 | – | – | |
| MobiDBLite | 249 | 268 | 20 | – | – | |
| Coils | 274 | 329 | 56 | – | – | |
| Coils | 351 | 371 | 21 | – | – | |
| MobiDBLite | 379 | 461 | 83 | – | – | |
| PANTHER | 469 | 1148 | 680 | 0 | – | |
| PANTHER | 469 | 1148 | 680 | 0 | – | |
| Phobius | 507 | 525 | 19 | – | – | |
| Phobius | 526 | 582 | 57 | – | – | |
| Phobius | 583 | 602 | 20 | – | – | |
| Pfam | 591 | 961 | 371 | 2.40E-60 | ||
| TIGRFAM | 592 | 872 | 281 | 4.20E-84 | ||
| Phobius | 603 | 610 | 8 | – | – | |
| TMHMM | 607 | 629 | 23 | – | – | |
| Phobius | 611 | 631 | 21 | – | – | |
| Phobius | 632 | 636 | 5 | – | – | |
| Phobius | 637 | 654 | 18 | – | – | |
| Phobius | 655 | 665 | 11 | – | – | |
| TMHMM | 666 | 688 | 23 | – | – | |
| Phobius | 666 | 688 | 23 | – | – | |
| Phobius | 689 | 693 | 5 | – | – | |
| TMHMM | 693 | 715 | 23 | – | – | |
| Phobius | 694 | 715 | 22 | – | – | |
| Phobius | 716 | 726 | 11 | – | – | |
| Phobius | 727 | 751 | 25 | – | – | |
| TMHMM | 728 | 750 | 23 | – | – | |
| Phobius | 752 | 770 | 19 | – | – | |
| TMHMM | 768 | 790 | 23 | – | – | |
| Phobius | 771 | 790 | 20 | – | – | |
| Phobius | 791 | 810 | 20 | – | – | |
| TMHMM | 810 | 832 | 23 | – | – | |
| Phobius | 811 | 840 | 30 | – | – | |
| Phobius | 841 | 851 | 11 | – | – | |
| Phobius | 852 | 871 | 20 | – | – | |
| TMHMM | 852 | 871 | 20 | – | – | |
| Phobius | 872 | 882 | 11 | – | – | |
| TMHMM | 876 | 898 | 23 | – | – | |
| Phobius | 883 | 905 | 23 | – | – | |
| Phobius | 906 | 910 | 5 | – | – | |
| TMHMM | 908 | 930 | 23 | – | – | |
| Phobius | 911 | 931 | 21 | – | – | |
| Phobius | 932 | 942 | 11 | – | – | |
| Phobius | 943 | 962 | 20 | – | – | |
| TMHMM | 943 | 965 | 23 | – | – | |
| Phobius | 963 | 1189 | 227 | – | – | |
| Gene3D | 988 | 1122 | 135 | 3.30E-32 | ||
| SUPERFAMILY | 990 | 1131 | 142 | 9.74E-29 | ||
| ProSiteProfiles | 993 | 1115 | 123 | 16.227 | ||
| Pfam | 994 | 1107 | 114 | 6.00E-20 | ||
| MobiDBLite | 1168 | 1189 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2627640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2627640.2, powered by CORGI.
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