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Lj1g3v2627670.1

Overview

Field Value
Gene ID Lj1g3v2627670
Transcript ID Lj1g3v2627670.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase RIO1-like [Glycine max] gi|356568362|ref|XP_003552380.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 30 30 – –
PANTHER
PTHR10593
44 419 376 3.90E-213 –
PANTHER
PTHR10593:SF23
44 419 376 3.90E-213
IPR017407
MobiDBLite
mobidb-lite
47 72 26 – –
SMART
SM00090
125 361 237 9.80E-127
IPR000687
ProSiteProfiles
PS50011
142 420 279 9.772
IPR000719
Gene3D
G3DSA:3.30.200.20
155 255 101 2.00E-22 –
CDD
cd05147
156 345 190 4.39E-146 –
SUPERFAMILY
SSF56112
156 342 187 2.41E-27
IPR011009
Pfam
PF01163
167 354 188 2.10E-76 –
Gene3D
G3DSA:1.10.510.10
266 361 96 4.40E-19 –
ProSitePatterns
PS01245
294 305 12 –
IPR018935

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj1g3v2627670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2627670.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.