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Lj1g3v2682510.1

Overview

Field Value
Gene ID Lj1g3v2682510
Transcript ID Lj1g3v2682510.1
Lotus japonicus genome version MG20 v3.0
Description Cysteine synthase [Medicago truncatula] gi|357507415|ref|XP_003623996.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10314:SF80
13 374 362 1.30E-269
IPR031111
PANTHER
PTHR10314
13 374 362 1.30E-269 –
SUPERFAMILY
SSF53686
55 361 307 1.70E-98
IPR001926
Pfam
PF00291
60 346 287 1.80E-67
IPR001926
TIGRFAM
TIGR01136
60 358 299 8.70E-123
IPR005856
TIGRFAM
TIGR01139
60 358 299 3.10E-125
IPR005859
CDD
cd01561
64 354 291 1.19E-144 –
ProSitePatterns
PS00901
85 103 19 –
IPR001216
Gene3D
G3DSA:3.40.50.1100
90 188 99 3.30E-37 –
Gene3D
G3DSA:3.40.50.1100
189 360 172 1.20E-75 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004124
Molecular function Cysteine synthase activity Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate.
Subterm of
GO:0005739
Cellular component Mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
Subterm of
GO:0006535
Biological process Cysteine biosynthetic process from serine The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.
Subterm of
GO:0019499
Biological process Cyanide metabolic process The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.
Subterm of
GO:0050017
Molecular function L-3-cyanoalanine synthase activity Catalysis of the reaction: L-cysteine + HCN = sulfide + L-3-cyanoalanine.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v2682510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2682510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.