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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2692680 |
| Transcript ID | Lj1g3v2692680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Cicer arietinum] gi|502105273|ref|XP_004492766.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 189 | 189 | 1.70E-133 | – | |
| Phobius | 1 | 35 | 35 | – | – | |
| PANTHER | 1 | 189 | 189 | 1.70E-133 | – | |
| Pfam | 2 | 128 | 127 | 1.50E-20 | ||
| Phobius | 36 | 59 | 24 | – | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| Phobius | 60 | 79 | 20 | – | – | |
| TMHMM | 80 | 102 | 23 | – | – | |
| Phobius | 80 | 103 | 24 | – | – | |
| Phobius | 104 | 108 | 5 | – | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| Phobius | 109 | 129 | 21 | – | – | |
| Phobius | 130 | 140 | 11 | – | – | |
| TMHMM | 141 | 160 | 20 | – | – | |
| Phobius | 141 | 160 | 20 | – | – | |
| Phobius | 161 | 189 | 29 | – | – | |
| Coils | 161 | 181 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2692680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2692680.1, powered by CORGI.
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