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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2738180 |
| Transcript ID | Lj1g3v2738180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable ferric reductase transmembrane component-like isoform 2 [Glycine max] gi|356520384|ref|XP_003528842.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 238 | 238 | 4.10E-198 | – | |
| PANTHER | 1 | 238 | 238 | 4.10E-198 | – | |
| SFLD | 1 | 406 | 406 | 0 | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 3 | 11 | 9 | – | – | |
| SFLD | 6 | 395 | 390 | 0 | – | |
| Phobius | 12 | 29 | 18 | – | – | |
| SUPERFAMILY | 16 | 101 | 86 | 7.78E-05 | ||
| ProSiteProfiles | 19 | 124 | 106 | 12.094 | ||
| Pfam | 23 | 122 | 100 | 6.20E-25 | ||
| CDD | 26 | 205 | 180 | 2.43E-38 | – | |
| Phobius | 30 | 239 | 210 | – | – | |
| PRINTS | 110 | 123 | 14 | 4.80E-06 | ||
| SUPERFAMILY | 112 | 182 | 71 | 2.36E-11 | – | |
| Gene3D | 127 | 206 | 80 | 2.00E-24 | – | |
| Pfam | 128 | 390 | 263 | 4.90E-28 | ||
| PRINTS | 133 | 150 | 18 | 4.80E-06 | ||
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 240 | 267 | 28 | – | – | |
| Phobius | 268 | 278 | 11 | – | – | |
| Phobius | 279 | 304 | 26 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 305 | 406 | 102 | – | – | |
| PANTHER | 349 | 406 | 58 | 4.10E-198 | – | |
| PANTHER | 349 | 406 | 58 | 4.10E-198 | – | |
| Gene3D | 354 | 401 | 48 | 2.00E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v2738180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2738180.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.