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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2752470 |
| Transcript ID | Lj1g3v2752470.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] gi|356568433|ref|XP_003552415.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 95 | 95 | 7.80E-40 | ||
| PANTHER | 1 | 309 | 309 | 5.20E-168 | – | |
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 1 | 309 | 309 | 5.20E-168 | ||
| TMHMM | 37 | 59 | 23 | – | – | |
| Phobius | 40 | 59 | 20 | – | – | |
| Phobius | 60 | 65 | 6 | – | – | |
| TMHMM | 66 | 88 | 23 | – | – | |
| Phobius | 66 | 88 | 23 | – | – | |
| Phobius | 89 | 179 | 91 | – | – | |
| Gene3D | 92 | 185 | 94 | 5.40E-18 | – | |
| Pfam | 100 | 303 | 204 | 1.70E-52 | ||
| Phobius | 180 | 200 | 21 | – | – | |
| Phobius | 201 | 309 | 109 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. | ||
| Biological process | CAAX-box protein processing | The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis. |
Expression pattern of Lj1g3v2752470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2752470.1, powered by CORGI.
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